Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMGP00000007674 | ENSPMGP00000007728 | ENSPMGP00000007674 | ENSPMGP00000007728 | SEC61 translocon gamma subunit. | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | 0.865 |
ENSPMGP00000007674 | ENSPMGP00000008224 | ENSPMGP00000007674 | ENSPMGP00000008224 | SEC61 translocon gamma subunit. | Coiled-coil domain containing 47. | 0.880 |
ENSPMGP00000007674 | ENSPMGP00000008542 | ENSPMGP00000007674 | ENSPMGP00000008542 | SEC61 translocon gamma subunit. | Uncharacterized protein. | 0.763 |
ENSPMGP00000007674 | ENSPMGP00000019159 | ENSPMGP00000007674 | ENSPMGP00000019159 | SEC61 translocon gamma subunit. | Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. | 0.879 |
ENSPMGP00000007674 | ENSPMGP00000019454 | ENSPMGP00000007674 | ENSPMGP00000019454 | SEC61 translocon gamma subunit. | Plug_translocon domain-containing protein. | 0.998 |
ENSPMGP00000007674 | ENSPMGP00000020674 | ENSPMGP00000007674 | ENSPMGP00000020674 | SEC61 translocon gamma subunit. | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 0.947 |
ENSPMGP00000007674 | ENSPMGP00000020847 | ENSPMGP00000007674 | ENSPMGP00000020847 | SEC61 translocon gamma subunit. | Transmembrane protein 147. | 0.868 |
ENSPMGP00000007674 | ENSPMGP00000024321 | ENSPMGP00000007674 | ENSPMGP00000024321 | SEC61 translocon gamma subunit. | WD repeat domain 83 opposite strand. | 0.717 |
ENSPMGP00000007674 | ENSPMGP00000025836 | ENSPMGP00000007674 | ENSPMGP00000025836 | SEC61 translocon gamma subunit. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.999 |
ENSPMGP00000007674 | RPL38 | ENSPMGP00000007674 | ENSPMGP00000001050 | SEC61 translocon gamma subunit. | Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. | 0.952 |
ENSPMGP00000007728 | ENSPMGP00000007674 | ENSPMGP00000007728 | ENSPMGP00000007674 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | SEC61 translocon gamma subunit. | 0.865 |
ENSPMGP00000007728 | ENSPMGP00000008224 | ENSPMGP00000007728 | ENSPMGP00000008224 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Coiled-coil domain containing 47. | 0.958 |
ENSPMGP00000007728 | ENSPMGP00000019159 | ENSPMGP00000007728 | ENSPMGP00000019159 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. | 0.951 |
ENSPMGP00000007728 | ENSPMGP00000019454 | ENSPMGP00000007728 | ENSPMGP00000019454 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Plug_translocon domain-containing protein. | 0.940 |
ENSPMGP00000007728 | ENSPMGP00000020674 | ENSPMGP00000007728 | ENSPMGP00000020674 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 0.865 |
ENSPMGP00000007728 | ENSPMGP00000020847 | ENSPMGP00000007728 | ENSPMGP00000020847 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Transmembrane protein 147. | 0.945 |
ENSPMGP00000007728 | ENSPMGP00000024321 | ENSPMGP00000007728 | ENSPMGP00000024321 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | WD repeat domain 83 opposite strand. | 0.717 |
ENSPMGP00000007728 | ENSPMGP00000025836 | ENSPMGP00000007728 | ENSPMGP00000025836 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.868 |
ENSPMGP00000007728 | RPL38 | ENSPMGP00000007728 | ENSPMGP00000001050 | Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. | Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. | 0.865 |
ENSPMGP00000008224 | ENSPMGP00000007674 | ENSPMGP00000008224 | ENSPMGP00000007674 | Coiled-coil domain containing 47. | SEC61 translocon gamma subunit. | 0.880 |
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