STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000008340Threonine aldolase 1. (349 aa)    
Predicted Functional Partners:
ENSPMGP00000008545
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.934
ENSPMGP00000021907
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.934
ENSPMGP00000007563
Glycine dehydrogenase (decarboxylating).
    
 0.930
ENSPMGP00000006703
Threonine synthase-like 2.
  
 0.929
THNSL1
Threonine synthase like 1.
  
 0.929
ENSPMGP00000023014
PALP domain-containing protein.
  
 
 0.923
ENSPMGP00000008360
Serine--pyruvate aminotransferase.
    
 0.921
ENSPMGP00000018709
Serine--pyruvate aminotransferase.
    
 0.921
ENSPMGP00000022899
Glycine C-acetyltransferase.
  
 
 0.918
ENSPMGP00000005135
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.914
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.