STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000008524Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
ENSPMGP00000001642
Notch receptor 2.
    
 0.867
ENSPMGP00000001223
Notch receptor 3.
    
 0.866
ENSPMGP00000018728
Negative elongation factor complex member B.
   
 0.831
ENSPMGP00000000863
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.818
ENSPMGP00000024093
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.818
ENSPMGP00000005585
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.773
ENSPMGP00000011611
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 0.743
ENSPMGP00000019940
Polymerase (RNA) II (DNA directed) polypeptide I; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.739
POLR2E
RNA polymerase II subunit E.
    
  0.734
ENSPMGP00000028551
Polymerase (RNA) II (DNA directed) polypeptide K.
    
  0.734
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.