STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000008636TLDc domain-containing protein. (173 aa)    
Predicted Functional Partners:
ENSPMGP00000001030
Zgc:153654.
  
  
0.913
ENSPMGP00000017325
UBX domain protein 7.
    
   0.860
ENSPMGP00000002561
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 
 0.712
ENSPMGP00000029988
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.705
ENSPMGP00000007019
Mitochondrial ribosomal protein L33.
   
 
 0.700
ENSPMGP00000015715
Mitochondrial ribosomal protein L47.
   
 
 0.696
ENSPMGP00000017752
Mitochondrial ribosomal protein L43.
   
   0.696
ENSPMGP00000023592
Mitochondrial ribosomal protein L27.
   
 
 0.694
ENSPMGP00000028743
Mitochondrial ribosomal protein L46.
   
 
 0.692
ENSPMGP00000007726
Mitochondrial ribosomal protein L23.
   
 
 0.690
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.