STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000009339Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (360 aa)    
Predicted Functional Partners:
ENSPMGP00000025612
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.981
ENSPMGP00000000011
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.973
ENSPMGP00000021157
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.973
ENSPMGP00000015347
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.969
ENSPMGP00000001742
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
    
 0.953
ENSPMGP00000027492
Squalene epoxidase a.
  
 0.907
ENSPMGP00000017471
Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.
    
 0.906
ENSPMGP00000000585
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.905
ENSPMGP00000000561
Uncharacterized protein.
   
 0.898
ENSPMGP00000009619
Churchill domain containing 1.
   
 0.892
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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