Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSPMGP00000000266 | ENSPMGP00000009697 | C-type lectin domain-containing protein. | Coagulation factor II (thrombin); Belongs to the peptidase S1 family. | 0.994 |
ENSPMGP00000000266 | ENSPMGP00000016103 | C-type lectin domain-containing protein. | Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family. | 0.586 |
ENSPMGP00000000266 | ENSPMGP00000025624 | C-type lectin domain-containing protein. | Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family. | 0.609 |
ENSPMGP00000000266 | ENSPMGP00000027193 | C-type lectin domain-containing protein. | Uncharacterized protein. | 0.941 |
ENSPMGP00000000266 | ENSPMGP00000027480 | C-type lectin domain-containing protein. | Coagulation factor II (thrombin) receptor. | 0.634 |
ENSPMGP00000006725 | ENSPMGP00000006979 | Fibrinogen alpha chain. | Fibrinogen beta chain. | 0.999 |
ENSPMGP00000006725 | ENSPMGP00000007388 | Fibrinogen alpha chain. | Fibrinogen gamma chain. | 0.999 |
ENSPMGP00000006725 | ENSPMGP00000009697 | Fibrinogen alpha chain. | Coagulation factor II (thrombin); Belongs to the peptidase S1 family. | 0.997 |
ENSPMGP00000006725 | ENSPMGP00000016103 | Fibrinogen alpha chain. | Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family. | 0.856 |
ENSPMGP00000006725 | ENSPMGP00000025624 | Fibrinogen alpha chain. | Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family. | 0.939 |
ENSPMGP00000006725 | ENSPMGP00000027193 | Fibrinogen alpha chain. | Uncharacterized protein. | 0.837 |
ENSPMGP00000006731 | ENSPMGP00000006979 | Fib_alpha domain-containing protein. | Fibrinogen beta chain. | 0.999 |
ENSPMGP00000006731 | ENSPMGP00000007388 | Fib_alpha domain-containing protein. | Fibrinogen gamma chain. | 0.999 |
ENSPMGP00000006731 | ENSPMGP00000009697 | Fib_alpha domain-containing protein. | Coagulation factor II (thrombin); Belongs to the peptidase S1 family. | 0.997 |
ENSPMGP00000006731 | ENSPMGP00000016103 | Fib_alpha domain-containing protein. | Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family. | 0.856 |
ENSPMGP00000006731 | ENSPMGP00000025624 | Fib_alpha domain-containing protein. | Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family. | 0.939 |
ENSPMGP00000006731 | ENSPMGP00000027193 | Fib_alpha domain-containing protein. | Uncharacterized protein. | 0.837 |
ENSPMGP00000006979 | ENSPMGP00000006725 | Fibrinogen beta chain. | Fibrinogen alpha chain. | 0.999 |
ENSPMGP00000006979 | ENSPMGP00000006731 | Fibrinogen beta chain. | Fib_alpha domain-containing protein. | 0.999 |
ENSPMGP00000006979 | ENSPMGP00000007388 | Fibrinogen beta chain. | Fibrinogen gamma chain. | 0.999 |
page 1 of 4