STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000010059Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
ENSPMGP00000015140
Serum response factor b.
    
 0.683
ENSPMGP00000015809
LIM domain binding 2a.
    
 0.616
ENSPMGP00000020166
LIM-domain binding 1b.
    
 0.616
ENSPMGP00000024988
LIM domain binding 1a.
    
 0.616
ENSPMGP00000007608
LIM homeobox 4.
    
 0.538
LHX3
LIM homeobox 3.
    
 0.538
ENSPMGP00000007654
Thiamin pyrophosphokinase 1.
    
  0.528
ENSPMGP00000000723
GATA binding protein 3.
    
 0.489
ENSPMGP00000007044
Trichorhinophalangeal syndrome I.
    
 0.489
ENSPMGP00000011144
GATA-type domain-containing protein.
    
 0.489
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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