STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000010741CDC42 small effector 1. (66 aa)    
Predicted Functional Partners:
ENSPMGP00000007611
PNPLA domain-containing protein.
      
 0.552
ENSPMGP00000022829
CDC42 effector protein (Rho GTPase binding) 4b.
      
 0.550
ENSPMGP00000021268
Transmembrane p24 trafficking protein 2.
      
 0.534
ENSPMGP00000006558
Uncharacterized protein.
    
 
 0.532
ENSPMGP00000018569
Cell division cycle 42.
    
 
 0.532
ENSPMGP00000000348
FLII actin remodeling protein.
      
 0.526
ENSPMGP00000008658
CDC42 effector protein (Rho GTPase binding) 4a.
      
 0.465
ENSPMGP00000007928
Uncharacterized protein.
    
 
 0.464
ENSPMGP00000014164
Uncharacterized protein.
    
 
 0.464
ENSPMGP00000003424
BAI1-associated protein 2-like 1a.
      
 0.448
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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