STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000011873Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
ENSPMGP00000003321
Solute carrier family 30 member 4.
   
 0.690
ENSPMGP00000009786
Solute carrier family 30 member 6.
   
 0.599
ENSPMGP00000009126
Solute carrier family 30 member 5.
   
 0.593
ENSPMGP00000012149
Solute carrier family 30 member 7.
   
 0.585
ENSPMGP00000024270
Solute carrier family 30 member 1a.
   
 0.578
ENSPMGP00000002168
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.522
ENSPMGP00000010504
Uncharacterized protein.
      
 0.520
ENSPMGP00000006499
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.518
ENSPMGP00000001988
Solute carrier family 39 member 9.
    
 
 0.508
ENSPMGP00000005998
Short chain dehydrogenase/reductase family 39U, member 1.
  
    0.500
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.