STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000012034ELKS/RAB6-interacting/CAST family member 1a. (803 aa)    
Predicted Functional Partners:
ENSPMGP00000027577
Uncharacterized protein.
 
      0.898
ENSPMGP00000009895
C2 domain-containing protein.
    
 
 0.841
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.841
ENSPMGP00000017052
Uncharacterized protein.
    
 
 0.527
ENSPMGP00000020559
C2 domain-containing protein.
    
 
 0.527
ENSPMGP00000020570
Uncharacterized protein.
    
 
 0.527
ENSPMGP00000023615
Regulating synaptic membrane exocytosis 3.
    
 
 0.527
ENSPMGP00000002418
PTPRF interacting protein alpha 2.
    
 
 0.516
ENSPMGP00000006300
Uncharacterized protein.
    
 
 0.516
ENSPMGP00000006301
Uncharacterized protein.
    
 
 0.516
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.