STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000012434Sorting nexin 19b. (930 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.547
ENSPMGP00000001682
Syntaxin 6; Belongs to the syntaxin family.
    
 0.547
ENSPMGP00000021765
Syntaxin 8.
    
 0.547
ENSPMGP00000024455
Syntaxin 10.
    
 0.547
ENSPMGP00000017531
Kinesin-associated protein 3b.
     
 0.538
ENSPMGP00000015904
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.537
ENSPMGP00000016297
Bardet-Biedl syndrome 9.
      
 0.528
ENSPMGP00000020455
STARD3 N-terminal like.
      
 0.524
ENSPMGP00000000903
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.523
ENSPMGP00000001967
Vesicle transport through interaction with t-SNAREs 1B.
     
 0.510
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.