STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000012741Charged multivesicular body protein 3. (222 aa)    
Predicted Functional Partners:
ENSPMGP00000004602
Charged multivesicular body protein 2A.
   
 0.999
ENSPMGP00000029842
Charged multivesicular body protein 7.
   
 0.995
ENSPMGP00000003301
Uncharacterized protein.
   
 0.993
CHMP4B
Uncharacterized protein.
   
 0.993
ENSPMGP00000011502
Chromatin modifying protein 1B.
 
 
 0.992
ENSPMGP00000022308
Uncharacterized protein.
   
 0.989
ENSPMGP00000002306
Uncharacterized protein.
   
 0.985
ENSPMGP00000025899
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.985
ENSPMGP00000003715
Charged multivesicular body protein 5a.
   
 0.972
ENSPMGP00000018583
Charged multivesicular body protein 5b.
   
 0.972
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.