STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000014324Histone deacetylase 9b. (587 aa)    
Predicted Functional Partners:
ENSPMGP00000001769
ARID domain-containing protein.
    
 0.928
ENSPMGP00000001784
Translocase of outer mitochondrial membrane 20.
    
 0.928
ENSPMGP00000004888
ARID domain-containing protein.
    
 0.928
ENSPMGP00000009400
H2A histone family, member Y2; Belongs to the histone H2A family.
   
 0.900
ENSPMGP00000014136
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.900
ENSPMGP00000007632
SIN3 transcription regulator family member B.
    
 0.819
ENSPMGP00000026235
SIN3 transcription regulator family member Ab.
    
 0.819
ENSPMGP00000029637
SIN3 transcription regulator family member Aa.
    
 0.819
ENSPMGP00000004468
Retinoblastoma binding protein 4, like.
   
 0.781
ENSPMGP00000013782
Retinoblastoma binding protein 4.
   
 0.781
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
Server load: low (22%) [HD]