STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000014491Homeobox C11a. (280 aa)    
Predicted Functional Partners:
HOXA7
Homeobox A7.
   
 
0.540
ENSPMGP00000008135
Pre-B-cell leukemia transcription factor 4.
    
 
 0.519
ENSPMGP00000012740
Pre-B-cell leukemia homeobox 2.
    
 
 0.519
ENSPMGP00000016436
Homeobox domain-containing protein.
    
 
 0.519
ENSPMGP00000016979
Pre-B-cell leukemia homeobox 1a.
    
 
 0.519
ENSPMGP00000028735
Homeobox domain-containing protein.
    
 
 0.519
ENSPMGP00000029229
Homeobox domain-containing protein.
    
 
 0.519
ENSPMGP00000014419
Homeobox C4a.
   
 
0.508
ENSPMGP00000014429
Homeobox C6a.
   
 
0.497
ENSPMGP00000000729
Homeobox D10a.
   
  
0.489
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.