STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000014603Zgc:103692. (292 aa)    
Predicted Functional Partners:
ENSPMGP00000019320
SLU7 homolog, splicing factor.
   
 
 0.887
ENSPMGP00000025208
Uncharacterized protein.
    
 
 0.881
ENSPMGP00000025210
Uncharacterized protein.
    
 
 0.881
ENSPMGP00000026176
MPN domain-containing protein.
    
 
 0.876
ENSPMGP00000026179
Uncharacterized protein.
    
 
 0.876
ENSPMGP00000026468
Pre-mRNA processing factor 38A.
   
  
 0.834
NKAPL
NFKB activating protein like.
   
 
  0.832
MED18
Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
    0.795
ENSPMGP00000002687
Prefoldin subunit 6.
   
    0.795
DHX35
DEAH-box helicase 35.
   
 0.779
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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