STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000015092LIM zinc-binding domain-containing protein. (128 aa)    
Predicted Functional Partners:
ENSPMGP00000009703
Uncharacterized protein.
    
 0.659
ENSPMGP00000028546
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.659
ENSPMGP00000000697
Uncharacterized protein.
   
 
 0.474
ENSPMGP00000002693
RAB10, member RAS oncogene family.
   
 
 0.474
ENSPMGP00000009327
RAB13, member RAS oncogene family.
   
 
 0.474
ENSPMGP00000017986
RAB8A, member RAS oncogene family.
   
 
 0.474
ENSPMGP00000019060
RAB15, member RAS oncogene family.
   
 
 0.474
ENSPMGP00000020032
RAB15, member RAS oncogene family.
   
 
 0.474
RAB8A
Uncharacterized protein.
   
 
 0.474
ENSPMGP00000029166
Uncharacterized protein.
   
 
 0.474
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.