STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000016108Uncharacterized protein; Belongs to the argonaute family. (791 aa)    
Predicted Functional Partners:
ENSPMGP00000012366
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
   
 0.897
ENSPMGP00000017503
Trinucleotide repeat containing adaptor 6C2.
    
 0.887
ENSPMGP00000028471
Trinucleotide repeat containing adaptor 6C1.
    
 0.832
ENSPMGP00000019784
Drosha ribonuclease III.
    
 0.829
ENSPMGP00000000946
DRBM domain-containing protein.
    
 0.818
TARBP2
RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...]
    
 0.818
ENSPMGP00000016172
Mitochondrial ribosomal protein L44.
    
 0.808
ENSPMGP00000018447
Translin-associated factor X.
    
 0.731
ENSPMGP00000018746
Translin.
   
 0.721
ENSPMGP00000027298
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.690
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.