STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000016663Elongation factor, RNA polymerase II, 2. (599 aa)    
Predicted Functional Partners:
ENSPMGP00000022652
ELL associated factor 1.
    
 0.958
ENSPMGP00000007808
AF4/FMR2 family, member 4.
   
 0.918
ENSPMGP00000007812
Uncharacterized protein.
   
 0.918
ENSPMGP00000024274
ELL associated factor 2.
    
 0.913
ENSPMGP00000006850
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.878
ENSPMGP00000011348
Interactor of little elongator complex ELL subunit 2.
    
 0.860
ENSPMGP00000026345
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.854
ENSPMGP00000025515
Transcription elongation factor SPT5.
    
 0.831
ENSPMGP00000027015
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.824
ENSPMGP00000016497
SPT4 homolog, DSIF elongation factor subunit.
    
 0.823
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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