Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSPMGP00000006850 | ENSPMGP00000007808 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | AF4/FMR2 family, member 4. | 0.984 |
ENSPMGP00000006850 | ENSPMGP00000007812 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.984 |
ENSPMGP00000006850 | ENSPMGP00000016497 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | SPT4 homolog, DSIF elongation factor subunit. | 0.849 |
ENSPMGP00000006850 | ENSPMGP00000016663 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | Elongation factor, RNA polymerase II, 2. | 0.878 |
ENSPMGP00000006850 | ENSPMGP00000022652 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | ELL associated factor 1. | 0.785 |
ENSPMGP00000006850 | ENSPMGP00000024274 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | ELL associated factor 2. | 0.780 |
ENSPMGP00000006850 | ENSPMGP00000025515 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | Transcription elongation factor SPT5. | 0.944 |
ENSPMGP00000006850 | ENSPMGP00000026345 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.862 |
ENSPMGP00000006850 | ENSPMGP00000027015 | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.706 |
ENSPMGP00000007808 | ENSPMGP00000006850 | AF4/FMR2 family, member 4. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.984 |
ENSPMGP00000007808 | ENSPMGP00000007812 | AF4/FMR2 family, member 4. | Uncharacterized protein. | 0.899 |
ENSPMGP00000007808 | ENSPMGP00000016497 | AF4/FMR2 family, member 4. | SPT4 homolog, DSIF elongation factor subunit. | 0.714 |
ENSPMGP00000007808 | ENSPMGP00000016663 | AF4/FMR2 family, member 4. | Elongation factor, RNA polymerase II, 2. | 0.918 |
ENSPMGP00000007808 | ENSPMGP00000022652 | AF4/FMR2 family, member 4. | ELL associated factor 1. | 0.908 |
ENSPMGP00000007808 | ENSPMGP00000024274 | AF4/FMR2 family, member 4. | ELL associated factor 2. | 0.912 |
ENSPMGP00000007808 | ENSPMGP00000025515 | AF4/FMR2 family, member 4. | Transcription elongation factor SPT5. | 0.767 |
ENSPMGP00000007808 | ENSPMGP00000026345 | AF4/FMR2 family, member 4. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.790 |
ENSPMGP00000007808 | ENSPMGP00000027015 | AF4/FMR2 family, member 4. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.766 |
ENSPMGP00000007812 | ENSPMGP00000006850 | Uncharacterized protein. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.984 |
ENSPMGP00000007812 | ENSPMGP00000007808 | Uncharacterized protein. | AF4/FMR2 family, member 4. | 0.899 |
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