STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000017485Protein tyrosine phosphatase receptor type Ua. (759 aa)    
Predicted Functional Partners:
ENSPMGP00000017487
Uncharacterized protein.
 
      0.766
ENSPMGP00000026560
Uncharacterized protein.
    
 0.743
ENSPMGP00000008341
MAM domain-containing protein.
 
      0.728
ENSPMGP00000004736
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.716
ENSPMGP00000025506
Uncharacterized protein.
    
  0.716
ENSPMGP00000027912
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.716
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.706
ENSPMGP00000003394
Junction plakoglobin b.
    
 0.684
ENSPMGP00000020143
Junction plakoglobin a.
    
 0.684
ENSPMGP00000029261
Uncharacterized protein.
    
 0.684
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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