STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000018470Ring finger and CCCH-type domains 1b. (1097 aa)    
Predicted Functional Partners:
ENSPMGP00000009697
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
    
  0.816
ENSPMGP00000029780
Ring finger and CCCH-type domains 2.
  
 
  
0.786
ENSPMGP00000016076
Myb-like, SWIRM and MPN domains 1.
   
   0.781
ENSPMGP00000028025
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.760
ENSPMGP00000002453
Not1 domain-containing protein.
   
 
 0.734
ENSPMGP00000002456
Uncharacterized protein.
   
 
 0.734
ENSPMGP00000000618
CCR4-NOT transcription complex, subunit 11.
    
 
 0.693
ENSPMGP00000013153
Uncharacterized protein.
    
 
 0.654
ENSPMGP00000013776
CCR4-NOT transcription complex subunit 9.
    
 
 0.654
ENSPMGP00000009372
CCR4-NOT transcription complex, subunit 7.
    
 
 0.652
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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