STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000019005Retrotrans_gag domain-containing protein. (352 aa)    
Predicted Functional Partners:
ENSPMGP00000013130
Uncharacterized protein.
    
 0.971
ENSPMGP00000013132
Helicase ATP-binding domain-containing protein.
    
 0.971
ENSPMGP00000009496
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 
 0.825
ENSPMGP00000010790
Lin-9 DREAM MuvB core complex component.
    
 0.697
ENSPMGP00000021173
Lin-54 DREAM MuvB core complex component.
    
 0.682
ENSPMGP00000023666
Lin-52 DREAM MuvB core complex component.
    
 0.678
ENSPMGP00000010990
FA complementation group L.
    
  0.660
ENSPMGP00000013136
FA complementation group F.
    
  0.660
ENSPMGP00000027007
FA complementation group G.
    
  0.660
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.657
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.