STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000022268WD repeat domain 26a. (619 aa)    
Predicted Functional Partners:
ENSPMGP00000021292
RAN binding protein 9.
   
 
 0.946
ENSPMGP00000021783
RAN binding protein 10.
   
 
 0.946
GID8
GID complex subunit 8 homolog.
    
 
 0.910
ENSPMGP00000010985
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.910
ENSPMGP00000014821
Required for meiotic nuclear division 5 homolog B.
  
 
 0.907
ENSPMGP00000012523
Uncharacterized protein.
   
  
 0.905
ENSPMGP00000012525
Uncharacterized protein.
   
  
 0.905
ENSPMGP00000012526
Uncharacterized protein.
   
  
 0.905
ENSPMGP00000007737
Armadillo repeat containing 8.
    
 
 0.859
ARMC8
Armadillo repeat containing 8.
    
 
 0.859
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.