ENSPMGP00000022294 protein (Periophthalmus magnuspinnatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPMGP00000022294

Uncharacterized protein. (115 aa)

Predicted Functional Partners:

ENSPMGP00000002938

0.619

ENSPMGP00000003124

0.619

ENSPMGP00000021538

0.619

ENSPMGP00000021569

0.619

ENSPMGP00000026228

0.619

ENSPMGP00000026232

0.619

ENSPMGP00000029528

0.551

ENSPMGP00000030068

0.551

ENSPMGP00000030069

0.551

ENSPMGP00000014650

0.550

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000002938	ENSPMGP00000003124	Protein kinase domain-containing protein.	Sema domain-containing protein.	0.913
ENSPMGP00000002938	ENSPMGP00000014650	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.617
ENSPMGP00000002938	ENSPMGP00000021538	Protein kinase domain-containing protein.	Sema domain-containing protein.	0.943
ENSPMGP00000002938	ENSPMGP00000021569	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.863
ENSPMGP00000002938	ENSPMGP00000022294	Protein kinase domain-containing protein.	Uncharacterized protein.	0.619
ENSPMGP00000002938	ENSPMGP00000026228	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.863
ENSPMGP00000002938	ENSPMGP00000026232	Protein kinase domain-containing protein.	Sema domain-containing protein.	0.953
ENSPMGP00000002938	ENSPMGP00000029528	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.639
ENSPMGP00000002938	ENSPMGP00000030068	Protein kinase domain-containing protein.	Uncharacterized protein.	0.622
ENSPMGP00000002938	ENSPMGP00000030069	Protein kinase domain-containing protein.	Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.622
ENSPMGP00000003124	ENSPMGP00000002938	Sema domain-containing protein.	Protein kinase domain-containing protein.	0.913
ENSPMGP00000003124	ENSPMGP00000014650	Sema domain-containing protein.	Fibroblast growth factor receptor.	0.617
ENSPMGP00000003124	ENSPMGP00000021538	Sema domain-containing protein.	Sema domain-containing protein.	0.861
ENSPMGP00000003124	ENSPMGP00000021569	Sema domain-containing protein.	Protein kinase domain-containing protein.	0.924
ENSPMGP00000003124	ENSPMGP00000022294	Sema domain-containing protein.	Uncharacterized protein.	0.619
ENSPMGP00000003124	ENSPMGP00000026228	Sema domain-containing protein.	Protein kinase domain-containing protein.	0.921
ENSPMGP00000003124	ENSPMGP00000026232	Sema domain-containing protein.	Sema domain-containing protein.	0.861
ENSPMGP00000003124	ENSPMGP00000029528	Sema domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.631
ENSPMGP00000003124	ENSPMGP00000030068	Sema domain-containing protein.	Uncharacterized protein.	0.622
ENSPMGP00000003124	ENSPMGP00000030069	Sema domain-containing protein.	Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.622