STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000022582Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
ENSPMGP00000005551
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.930
ENSPMGP00000002096
USO1 vesicle transport factor.
   
 0.833
ENSPMGP00000006706
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.807
ENSPMGP00000026094
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.807
ENSPMGP00000003842
GRASP55_65 domain-containing protein.
    
 0.770
GORASP2
GRASP55_65 domain-containing protein.
    
 0.770
GORASP2-2
Golgi reassembly stacking protein 2.
    
 0.770
ENSPMGP00000021268
Transmembrane p24 trafficking protein 2.
    
  0.689
ENSPMGP00000016579
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.674
ENSPMGP00000000784
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.661
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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