STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000023156RBR-type E3 ubiquitin transferase. (300 aa)    
Predicted Functional Partners:
ENSPMGP00000007680
UEV and lactate/malate dehyrogenase domains.
   
 0.744
UBE2L3
Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.736
ENSPMGP00000021359
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.736
ENSPMGP00000024069
Baculoviral IAP repeat containing 6.
    
 0.723
ENSPMGP00000011545
Zinc finger, AN1-type domain 4.
   
 0.680
ENSPMGP00000019064
Ubiquitin-like domain-containing protein.
    
  0.659
ENSPMGP00000021568
Ubiquitin-like domain-containing protein.
    
  0.659
ENSPMGP00000025558
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.659
ENSPMGP00000003256
RBR-type E3 ubiquitin transferase.
    
 0.655
ENSPMGP00000013687
Uncharacterized protein.
    
 0.655
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.