STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000023295Ubiquitin-like domain-containing protein. (90 aa)    
Predicted Functional Partners:
ENSPMGP00000016076
Myb-like, SWIRM and MPN domains 1.
   
 0.996
ENSPMGP00000017325
UBX domain protein 7.
    
 0.994
ENSPMGP00000022075
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.988
ENSPMGP00000009851
Cullin 1b; Belongs to the cullin family.
    
 0.986
ENSPMGP00000003987
SUMO peptidase family member, NEDD8 specific.
    
 0.985
ENSPMGP00000017027
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
   
 0.983
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.982
COPS6
COP9 signalosome subunit 6.
   
 0.982
ENSPMGP00000029594
COP9 signalosome subunit 5.
   
 0.982
ENSPMGP00000013487
Cullin 2; Belongs to the cullin family.
    
 0.979
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.