STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP3Latent transforming growth factor beta binding protein 3. (1039 aa)    
Predicted Functional Partners:
ENSPMGP00000006593
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.927
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.740
ENSPMGP00000006528
Ig-like domain-containing protein.
   
 0.725
ENSPMGP00000005874
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.703
ENSPMGP00000010749
Transforming growth factor, beta 2.
    
 0.703
ENSPMGP00000021266
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.696
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.674
NCSTN
Nicastrin.
    
 0.652
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.651
ENSPMGP00000023545
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.651
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.