STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000026707Importin subunit alpha; Belongs to the importin alpha family. (525 aa)    
Predicted Functional Partners:
ENSPMGP00000001188
Karyopherin (importin) beta 1.
   
 0.940
CSE1L
CSE1 chromosome segregation 1-like (yeast).
   
 0.907
ENSPMGP00000021739
CSE1 chromosome segregation 1-like (yeast).
   
 0.907
ENSPMGP00000015882
Retinitis pigmentosa GTPase regulator b.
   
 
 0.833
ENSPMGP00000008128
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
  0.781
ENSPMGP00000011822
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
    
  0.781
ENSPMGP00000029626
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 
 0.774
ENSPMGP00000012492
Importin subunit alpha; Belongs to the importin alpha family.
  
0.772
ENSPMGP00000017099
Importin subunit alpha; Belongs to the importin alpha family.
  
0.772
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.769
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.