STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000027811tRNA methyltransferase 44 homolog. (348 aa)    
Predicted Functional Partners:
ENSPMGP00000005454
Pseudouridine synthase 1.
   
  
 0.714
ENSPMGP00000026122
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.690
METTL1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.668
ENSPMGP00000013834
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.649
ENSPMGP00000016203
tRNA methyltransferase 13 homolog.
   
  
 0.612
ENSPMGP00000000071
TruB pseudouridine (psi) synthase family member 1.
   
  
 0.586
ENSPMGP00000017029
WD repeat domain 4.
   
  
 0.585
ENSPMGP00000024476
Si:dkey-85a20.4.
   
  
 0.585
ENSPMGP00000005085
WD repeat domain 6.
   
  
 0.576
ENSPMGP00000001132
Pseudouridylate synthase 3.
   
  
 0.557
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.