STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000027918Si:ch1073-440b2.1. (625 aa)    
Predicted Functional Partners:
ENSPMGP00000013690
BRCT domain-containing protein.
    
 0.776
UBE2N
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.770
ENSPMGP00000022577
Ubiquitin-like domain-containing protein.
    
 0.726
ENSPMGP00000022579
Uncharacterized protein.
    
 0.726
ENSPMGP00000029700
Uncharacterized protein.
   
 0.713
ENSPMGP00000021568
Ubiquitin-like domain-containing protein.
    
 0.704
ENSPMGP00000025558
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.704
ENSPMGP00000023701
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.683
ENSPMGP00000019064
Ubiquitin-like domain-containing protein.
    
 0.671
ENSPMGP00000028030
BRCT domain-containing protein.
    
 0.669
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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