STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000027931Uncharacterized protein. (544 aa)    
Predicted Functional Partners:
ENSPMGP00000006528
Ig-like domain-containing protein.
    
  0.716
ENSPMGP00000028030
BRCT domain-containing protein.
    
 0.635
ENSPMGP00000010811
Uncharacterized protein.
    
  0.627
ENSPMGP00000010812
Uncharacterized protein.
    
  0.627
YTHDC2
YTH domain containing 2.
    
  0.577
YTHDC2-2
YTH domain containing 2.
    
  0.577
ENSPMGP00000005917
General transcription factor IIIC, polypeptide 3.
    
 0.572
ENSPMGP00000029585
Serum/glucocorticoid regulated kinase family member 3.
    
  0.556
ENSPMGP00000004417
Speckle type BTB/POZ protein like b.
   
  0.555
SPOP
Speckle type BTB/POZ protein.
   
  0.555
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.