STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000029640WD repeat domain 61. (186 aa)    
Predicted Functional Partners:
ENSPMGP00000002335
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
ENSPMGP00000010593
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
ENSPMGP00000011204
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.999
ENSPMGP00000014093
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
ENSPMGP00000016420
Tetratricopeptide repeat domain 37.
    
 0.999
ENSPMGP00000024368
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.999
ENSPMGP00000014412
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.972
ENSPMGP00000025515
Transcription elongation factor SPT5.
    
 0.944
ENSPMGP00000005311
Receptor for activated C kinase 1.
  
 
 
0.943
ENSPMGP00000026251
Damage-specific DNA binding protein 1.
    
 0.942
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.