STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_8399Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (585 aa)    
Predicted Functional Partners:
B9Z65_6826
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.922
B9Z65_132
Importin subunit beta-1.
    
   0.922
B9Z65_4154
Ribosome production factor 2.
   
   0.912
B9Z65_2144
Uncharacterized protein.
   
   0.895
B9Z65_2151
PUM-HD domain-containing protein.
   
 
 0.893
B9Z65_8652
RRM domain-containing protein.
   
   0.892
B9Z65_6915
Uncharacterized protein.
   
   0.887
B9Z65_8322
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.884
B9Z65_7661
Uncharacterized protein.
   
 
 0.879
B9Z65_7947
Brix domain-containing protein.
   
   0.877
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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