STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_8758RRM domain-containing protein. (210 aa)    
Predicted Functional Partners:
B9Z65_4307
Nuclear cap-binding protein subunit 2.
    
0.991
B9Z65_667
Uncharacterized protein.
 
 
 0.990
B9Z65_641
Uncharacterized protein.
    
  0.986
B9Z65_427
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.975
B9Z65_696
RRM domain-containing protein.
  
 
 0.952
B9Z65_1823
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.951
B9Z65_5421
RRM domain-containing protein.
  
0.948
B9Z65_6213
RNA-binding post-transcriptional regulator cip2.
   
 0.924
B9Z65_3064
Uncharacterized protein.
   
 0.914
B9Z65_5968
Uncharacterized protein.
    
 0.913
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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