B9Z65_1488 protein (Elsinoe australis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9Z65_1488

DLH domain-containing protein. (269 aa)

Predicted Functional Partners:

B9Z65_1425

0.892

B9Z65_6583

0.691

B9Z65_5822

0.670

TIF34

0.573

B9Z65_1577

0.541

B9Z65_6492

0.541

B9Z65_3942

0.487

B9Z65_2380

0.468

B9Z65_1489

0.467

B9Z65_1487

0.458

Your Current Organism:

Elsinoe australis

NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z65_1425	B9Z65_1487	A0A2P7YFW6	A0A2P7YG26	Uncharacterized protein.	RING-type domain-containing protein.	0.420
B9Z65_1425	B9Z65_1488	A0A2P7YFW6	A0A2P7YG14	Uncharacterized protein.	DLH domain-containing protein.	0.892
B9Z65_1487	B9Z65_1425	A0A2P7YG26	A0A2P7YFW6	RING-type domain-containing protein.	Uncharacterized protein.	0.420
B9Z65_1487	B9Z65_1488	A0A2P7YG26	A0A2P7YG14	RING-type domain-containing protein.	DLH domain-containing protein.	0.458
B9Z65_1488	B9Z65_1425	A0A2P7YG14	A0A2P7YFW6	DLH domain-containing protein.	Uncharacterized protein.	0.892
B9Z65_1488	B9Z65_1487	A0A2P7YG14	A0A2P7YG26	DLH domain-containing protein.	RING-type domain-containing protein.	0.458
B9Z65_1488	B9Z65_1489	A0A2P7YG14	A0A2P7YG15	DLH domain-containing protein.	Uncharacterized protein.	0.467
B9Z65_1488	B9Z65_1577	A0A2P7YG14	A0A2P7YGB5	DLH domain-containing protein.	Protein AIM2.	0.541
B9Z65_1488	B9Z65_2380	A0A2P7YG14	A0A2P7ZAJ8	DLH domain-containing protein.	Uncharacterized protein.	0.468
B9Z65_1488	B9Z65_3942	A0A2P7YG14	A0A2P7Z1E8	DLH domain-containing protein.	Protein AIM2.	0.487
B9Z65_1488	B9Z65_5822	A0A2P7YG14	A0A2P7YJ92	DLH domain-containing protein.	Protein AIM2.	0.670
B9Z65_1488	B9Z65_6492	A0A2P7YG14	A0A2P8A8T9	DLH domain-containing protein.	Protein AIM2.	0.541
B9Z65_1488	B9Z65_6583	A0A2P7YG14	A0A2P8A916	DLH domain-containing protein.	Protein AIM2.	0.691
B9Z65_1488	TIF34	A0A2P7YG14	A0A2P7Z277	DLH domain-containing protein.	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.573
B9Z65_1489	B9Z65_1488	A0A2P7YG15	A0A2P7YG14	Uncharacterized protein.	DLH domain-containing protein.	0.467
B9Z65_1577	B9Z65_1488	A0A2P7YGB5	A0A2P7YG14	Protein AIM2.	DLH domain-containing protein.	0.541
B9Z65_2380	B9Z65_1488	A0A2P7ZAJ8	A0A2P7YG14	Uncharacterized protein.	DLH domain-containing protein.	0.468
B9Z65_3942	B9Z65_1488	A0A2P7Z1E8	A0A2P7YG14	Protein AIM2.	DLH domain-containing protein.	0.487
B9Z65_5822	B9Z65_1488	A0A2P7YJ92	A0A2P7YG14	Protein AIM2.	DLH domain-containing protein.	0.670
B9Z65_6492	B9Z65_1488	A0A2P8A8T9	A0A2P7YG14	Protein AIM2.	DLH domain-containing protein.	0.541