STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_1830H/ACA ribonucleoprotein complex subunit 3. (62 aa)    
Predicted Functional Partners:
B9Z65_5745
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.990
B9Z65_6332
PUA domain-containing protein.
   
 0.987
B9Z65_7859
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.983
B9Z65_985
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.944
B9Z65_6912
TruB_N domain-containing protein.
   
 0.934
B9Z65_5283
H/ACA ribonucleoprotein complex non-core subunit NAF1.
   
 
 0.874
B9Z65_5586
Uncharacterized protein.
    
 0.862
B9Z65_5794
Ribosomal_L7Ae domain-containing protein.
   
 0.842
B9Z65_1963
Ribosomal_L7Ae domain-containing protein.
   
 0.842
B9Z65_1172
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.842
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.