B9Z65_1233 protein (Elsinoe australis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9Z65_1233

Checkpoint protein hus1. (676 aa)

Predicted Functional Partners:

B9Z65_6756

0.999

B9Z65_2549

0.994

B9Z65_4543

0.991

B9Z65_4245

0.982

B9Z65_2993

0.981

B9Z65_8013

0.977

B9Z65_3034

0.973

B9Z65_3027

0.973

B9Z65_6272

0.971

B9Z65_4193

0.943

Your Current Organism:

Elsinoe australis

NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z65_1233	B9Z65_2549	A0A2P7YQ05	A0A2P8A3Y0	Checkpoint protein hus1.	3'-5' exonuclease domain-containing protein.	0.994
B9Z65_1233	B9Z65_2993	A0A2P7YQ05	A0A2P7ZU48	Checkpoint protein hus1.	Replication factor C subunit 4.	0.981
B9Z65_1233	B9Z65_3027	A0A2P7YQ05	A0A2P7ZU80	Checkpoint protein hus1.	Uncharacterized protein.	0.973
B9Z65_1233	B9Z65_3034	A0A2P7YQ05	A0A2P7ZU78	Checkpoint protein hus1.	Uncharacterized protein.	0.973
B9Z65_1233	B9Z65_4193	A0A2P7YQ05	A0A2P7Z233	Checkpoint protein hus1.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.943
B9Z65_1233	B9Z65_4245	A0A2P7YQ05	A0A2P7Z2A8	Checkpoint protein hus1.	Replication factor C subunit 2.	0.982
B9Z65_1233	B9Z65_4543	A0A2P7YQ05	A0A2P8A5B7	Checkpoint protein hus1.	Uncharacterized protein.	0.991
B9Z65_1233	B9Z65_6272	A0A2P7YQ05	A0A2P8A855	Checkpoint protein hus1.	Replication factor C subunit 3.	0.971
B9Z65_1233	B9Z65_6756	A0A2P7YQ05	A0A2P8AE55	Checkpoint protein hus1.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.999
B9Z65_1233	B9Z65_8013	A0A2P7YQ05	A0A2P7YVT1	Checkpoint protein hus1.	Replication factor C subunit 5.	0.977
B9Z65_2549	B9Z65_1233	A0A2P8A3Y0	A0A2P7YQ05	3'-5' exonuclease domain-containing protein.	Checkpoint protein hus1.	0.994
B9Z65_2549	B9Z65_2993	A0A2P8A3Y0	A0A2P7ZU48	3'-5' exonuclease domain-containing protein.	Replication factor C subunit 4.	0.990
B9Z65_2549	B9Z65_3027	A0A2P8A3Y0	A0A2P7ZU80	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.991
B9Z65_2549	B9Z65_3034	A0A2P8A3Y0	A0A2P7ZU78	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.991
B9Z65_2549	B9Z65_4193	A0A2P8A3Y0	A0A2P7Z233	3'-5' exonuclease domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.999
B9Z65_2549	B9Z65_4245	A0A2P8A3Y0	A0A2P7Z2A8	3'-5' exonuclease domain-containing protein.	Replication factor C subunit 2.	0.991
B9Z65_2549	B9Z65_4543	A0A2P8A3Y0	A0A2P8A5B7	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.995
B9Z65_2549	B9Z65_6272	A0A2P8A3Y0	A0A2P8A855	3'-5' exonuclease domain-containing protein.	Replication factor C subunit 3.	0.990
B9Z65_2549	B9Z65_6756	A0A2P8A3Y0	A0A2P8AE55	3'-5' exonuclease domain-containing protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.993
B9Z65_2549	B9Z65_8013	A0A2P8A3Y0	A0A2P7YVT1	3'-5' exonuclease domain-containing protein.	Replication factor C subunit 5.	0.991