STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_3995Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (455 aa)    
Predicted Functional Partners:
B9Z65_8656
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
 
      0.884
B9Z65_230
60S ribosomal protein L7.
  
 
 0.850
B9Z65_2814
Putative ribosomal protein L29.
  
 
 0.839
B9Z65_958
60S ribosomal protein L5-B.
  
 
 0.838
B9Z65_6168
Ribosomal protein L23 N-terminal domain-containing protein.
  
 
 0.837
B9Z65_3533
60S ribosomal protein L26.
  
   0.830
B9Z65_5070
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.817
B9Z65_4547
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.802
B9Z65_2431
Uncharacterized protein.
  
   0.777
B9Z65_3920
54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.
  
   0.777
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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