STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_4287D-aminoacyl-tRNA deacylase. (139 aa)    
Predicted Functional Partners:
B9Z65_6356
Tyrosine--tRNA ligase.
     
 0.510
B9Z65_3460
Tyrosine--tRNA ligase.
     
 0.505
B9Z65_1005
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      0.487
B9Z65_5395
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
  
 0.475
B9Z65_4286
Peptidyl-prolyl cis-trans isomerase D.
      0.462
B9Z65_5925
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
      
 0.454
B9Z65_3555
tRNA-aminoacylation cofactor arc1.
  
  
 0.454
B9Z65_8803
ATP-dependent RNA helicase mtr4.
      
 0.450
B9Z65_7948
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.426
B9Z65_4888
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.426
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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