STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_5658Protein argonaute. (1092 aa)    
Predicted Functional Partners:
B9Z65_1248
Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
   
 0.976
B9Z65_6232
Double-strand-specific pac1 ribonuclease.
    
 0.873
B9Z65_4109
Uncharacterized protein.
    
 0.835
B9Z65_4108
Uncharacterized protein.
    
 0.835
B9Z65_5973
Uncharacterized protein.
    
 0.825
B9Z65_8551
Translin-associated protein X.
    
 0.771
B9Z65_4832
Importin N-terminal domain-containing protein.
    
 0.756
B9Z65_605
Uncharacterized protein.
   
 0.755
B9Z65_3103
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.744
B9Z65_8803
ATP-dependent RNA helicase mtr4.
    
 0.738
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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