STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_6875Uncharacterized protein. (657 aa)    
Predicted Functional Partners:
B9Z65_7740
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 0.999
B9Z65_6928
Nudix hydrolase domain-containing protein.
  
 0.996
B9Z65_6295
Uncharacterized protein.
   
 0.981
B9Z65_1279
DNA topoisomerase 2-associated protein pat1.
    
 0.980
B9Z65_7136
Uncharacterized protein.
    
 
 0.915
B9Z65_6018
NTP_transf_9 domain-containing protein.
  
 0.912
B9Z65_7197
Uncharacterized protein.
  
 0.912
B9Z65_1961
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
   
 
 0.891
B9Z65_6879
SurE domain-containing protein.
    
 
 0.885
B9Z65_4916
Uncharacterized protein.
    
 
 0.885
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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