STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_7246Tuberous sclerosis 1. (664 aa)    
Predicted Functional Partners:
B9Z65_8400
Midasin.
    
 0.871
B9Z65_288
WD_REPEATS_REGION domain-containing protein.
   
  0.559
B9Z65_7313
Ipi1_N domain-containing protein.
    
 0.549
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.528
B9Z65_5331
Kremen protein 1.
    
 0.509
B9Z65_6063
Polynucleotide 5'-hydroxyl-kinase grc3.
    
  0.485
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.482
B9Z65_7065
Uncharacterized protein.
    
  0.481
B9Z65_3793
ULP_PROTEASE domain-containing protein.
    
  0.463
B9Z65_4579
CRIB domain-containing protein.
    
  0.450
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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