STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_7289Endopolygalacturonase B; Belongs to the glycosyl hydrolase 28 family. (427 aa)    
Predicted Functional Partners:
B9Z65_1185
Endopolygalacturonase B.
    
0.816
B9Z65_1684
Periplasmic beta-glucosidase.
    
  0.794
B9Z65_4273
Endopolygalacturonase B.
     
0.789
B9Z65_8066
Paxillin-like protein 1.
     
 0.785
B9Z65_8268
Uncharacterized protein.
     
 0.784
B9Z65_8750
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.746
B9Z65_1420
60S ribosomal protein L21-A.
   
   0.711
B9Z65_3994
Glycerophosphodiester phosphodiesterase GDE1.
    
  0.695
B9Z65_581
26S proteasome regulatory subunit rpn11.
    
  0.683
B9Z65_720
Endopolygalacturonase B.
  
  
 
0.677
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.