B9Z65_5041 protein (Elsinoe australis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9Z65_5041

Uncharacterized protein. (257 aa)

Predicted Functional Partners:

B9Z65_8526

0.936

B9Z65_5909

0.845

B9Z65_8147

0.782

B9Z65_5031

0.781

B9Z65_5842

0.780

B9Z65_1472

0.744

B9Z65_6457

0.740

B9Z65_7686

0.729

B9Z65_275

0.723

B9Z65_8000

0.697

Your Current Organism:

Elsinoe australis

NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z65_1472	B9Z65_275	A0A2P7YFZ8	A0A2P7ZQ41	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Protoheme IX farnesyltransferase, mitochondrial.	0.807
B9Z65_1472	B9Z65_5031	A0A2P7YFZ8	A0A2P7ZCW4	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.799
B9Z65_1472	B9Z65_5041	A0A2P7YFZ8	A0A2P7ZCX4	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Uncharacterized protein.	0.744
B9Z65_1472	B9Z65_5842	A0A2P7YFZ8	A0A2P7YJA6	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Uncharacterized protein.	0.738
B9Z65_1472	B9Z65_5909	A0A2P7YFZ8	A0A2P7YJF6	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Uncharacterized protein.	0.939
B9Z65_1472	B9Z65_6457	A0A2P7YFZ8	A0A2P8A8P5	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	ATP-dependent RNA helicase ROK1.	0.495
B9Z65_1472	B9Z65_8147	A0A2P7YFZ8	A0A2P7YW91	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.738
B9Z65_1472	B9Z65_8526	A0A2P7YFZ8	A0A2P7YE13	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Cytochrome c oxidase assembly protein COX15.	0.935
B9Z65_275	B9Z65_1472	A0A2P7ZQ41	A0A2P7YFZ8	Protoheme IX farnesyltransferase, mitochondrial.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.807
B9Z65_275	B9Z65_5031	A0A2P7ZQ41	A0A2P7ZCW4	Protoheme IX farnesyltransferase, mitochondrial.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.699
B9Z65_275	B9Z65_5041	A0A2P7ZQ41	A0A2P7ZCX4	Protoheme IX farnesyltransferase, mitochondrial.	Uncharacterized protein.	0.723
B9Z65_275	B9Z65_5842	A0A2P7ZQ41	A0A2P7YJA6	Protoheme IX farnesyltransferase, mitochondrial.	Uncharacterized protein.	0.802
B9Z65_275	B9Z65_5909	A0A2P7ZQ41	A0A2P7YJF6	Protoheme IX farnesyltransferase, mitochondrial.	Uncharacterized protein.	0.987
B9Z65_275	B9Z65_6457	A0A2P7ZQ41	A0A2P8A8P5	Protoheme IX farnesyltransferase, mitochondrial.	ATP-dependent RNA helicase ROK1.	0.882
B9Z65_275	B9Z65_7686	A0A2P7ZQ41	A0A2P8A089	Protoheme IX farnesyltransferase, mitochondrial.	Uncharacterized protein.	0.779
B9Z65_275	B9Z65_8147	A0A2P7ZQ41	A0A2P7YW91	Protoheme IX farnesyltransferase, mitochondrial.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.802
B9Z65_275	B9Z65_8526	A0A2P7ZQ41	A0A2P7YE13	Protoheme IX farnesyltransferase, mitochondrial.	Cytochrome c oxidase assembly protein COX15.	0.989
B9Z65_5031	B9Z65_1472	A0A2P7ZCW4	A0A2P7YFZ8	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.799
B9Z65_5031	B9Z65_275	A0A2P7ZCW4	A0A2P7ZQ41	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Protoheme IX farnesyltransferase, mitochondrial.	0.699
B9Z65_5031	B9Z65_5041	A0A2P7ZCW4	A0A2P7ZCX4	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Uncharacterized protein.	0.781