STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_5188CCA tRNA nucleotidyltransferase, mitochondrial. (583 aa)    
Predicted Functional Partners:
B9Z65_5231
Pre-mRNA-splicing factor prp1.
   
 0.964
B9Z65_6956
MFAP1 domain-containing protein.
   
  0.959
B9Z65_5045
Pre-mRNA-splicing factor 38A.
   
 0.909
B9Z65_4452
U5 small nuclear ribonucleoprotein component.
    
 
 0.886
B9Z65_3856
U4/U6.U5 small nuclear ribonucleoprotein component snu23.
    
  0.845
B9Z65_3231
CPSF_A domain-containing protein.
    
   0.828
B9Z65_5245
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
  0.816
B9Z65_2469
Matrin-type domain-containing protein.
   
  0.815
B9Z65_7639
Uncharacterized protein.
   
  0.815
B9Z65_1606
Pre-mRNA-splicing factor-like protein 3.
    
 
 0.757
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.