B9Z65_5242 protein (Elsinoe australis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9Z65_5242

UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (389 aa)

Predicted Functional Partners:

B9Z65_171

0.998

B9Z65_8364

0.996

B9Z65_7751

0.986

B9Z65_3170

0.915

B9Z65_4697

0.915

B9Z65_1073

0.915

B9Z65_459

0.911

B9Z65_8627

0.908

B9Z65_4619

0.908

B9Z65_812

0.908

Your Current Organism:

Elsinoe australis

NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z65_1073	B9Z65_171	A0A2P8AI74	A0A2P7Z7K9	Uncharacterized protein.	Galactokinase.	0.480
B9Z65_1073	B9Z65_4619	A0A2P8AI74	A0A2P8A5K3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.	0.565
B9Z65_1073	B9Z65_5242	A0A2P8AI74	A0A2P7ZDH0	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.915
B9Z65_1073	B9Z65_7751	A0A2P8AI74	A0A2P8A0H3	Uncharacterized protein.	Bifunctional protein gal10.	0.915
B9Z65_1073	B9Z65_812	A0A2P8AI74	A0A2P8AJL2	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.	0.565
B9Z65_1073	B9Z65_8627	A0A2P8AI74	A0A2P7YEB2	Uncharacterized protein.	Kremen protein 1; Belongs to the glycosyl hydrolase 1 family.	0.565
B9Z65_171	B9Z65_1073	A0A2P7Z7K9	A0A2P8AI74	Galactokinase.	Uncharacterized protein.	0.480
B9Z65_171	B9Z65_3170	A0A2P7Z7K9	A0A2P7ZUL8	Galactokinase.	Uncharacterized protein.	0.480
B9Z65_171	B9Z65_459	A0A2P7Z7K9	A0A2P8AIN0	Galactokinase.	UTP--glucose-1-phosphate uridylyltransferase.	0.826
B9Z65_171	B9Z65_4697	A0A2P7Z7K9	A0A2P8A5S9	Galactokinase.	Uncharacterized protein.	0.480
B9Z65_171	B9Z65_5242	A0A2P7Z7K9	A0A2P7ZDH0	Galactokinase.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.998
B9Z65_171	B9Z65_7751	A0A2P7Z7K9	A0A2P8A0H3	Galactokinase.	Bifunctional protein gal10.	0.998
B9Z65_171	B9Z65_8364	A0A2P7Z7K9	A0A2P7YDI6	Galactokinase.	Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.	0.997
B9Z65_3170	B9Z65_171	A0A2P7ZUL8	A0A2P7Z7K9	Uncharacterized protein.	Galactokinase.	0.480
B9Z65_3170	B9Z65_4619	A0A2P7ZUL8	A0A2P8A5K3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.	0.525
B9Z65_3170	B9Z65_5242	A0A2P7ZUL8	A0A2P7ZDH0	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.915
B9Z65_3170	B9Z65_7751	A0A2P7ZUL8	A0A2P8A0H3	Uncharacterized protein.	Bifunctional protein gal10.	0.915
B9Z65_3170	B9Z65_812	A0A2P7ZUL8	A0A2P8AJL2	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.	0.525
B9Z65_3170	B9Z65_8627	A0A2P7ZUL8	A0A2P7YEB2	Uncharacterized protein.	Kremen protein 1; Belongs to the glycosyl hydrolase 1 family.	0.525
B9Z65_459	B9Z65_171	A0A2P8AIN0	A0A2P7Z7K9	UTP--glucose-1-phosphate uridylyltransferase.	Galactokinase.	0.826