STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_5300Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (581 aa)    
Predicted Functional Partners:
B9Z65_1014
Uroporphyrinogen decarboxylase.
 
 
 0.991
B9Z65_1637
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.988
B9Z65_2306
Uncharacterized protein.
  
 
 0.916
B9Z65_1502
Phytoene desaturase.
   
 
 0.843
B9Z65_959
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
  0.811
B9Z65_2087
L-2-hydroxyglutarate dehydrogenase, mitochondrial.
    
  0.794
B9Z65_5336
Uroporphyrinogen-III synthase.
  
 
 0.788
B9Z65_5303
U3 small nucleolar RNA-associated protein 20.
 
  
   0.691
B9Z65_5242
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.688
B9Z65_7751
Bifunctional protein gal10.
    
  0.688
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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