STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_402ER-derived vesicles protein. (138 aa)    
Predicted Functional Partners:
B9Z65_836
Endoplasmic reticulum vesicle protein 25.
   
 0.862
B9Z65_401
WD_REPEATS_REGION domain-containing protein.
 
 
    0.811
B9Z65_2210
Endosomal protein P24B.
    
 0.809
B9Z65_5408
Protein transport protein sec24.
    
 0.793
B9Z65_5288
Uncharacterized protein.
     
 0.786
B9Z65_3311
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.763
B9Z65_7738
GRASP55_65 domain-containing protein.
   
 0.763
B9Z65_8682
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.743
B9Z65_5887
WD_REPEATS_REGION domain-containing protein.
     
 0.734
B9Z65_1423
Integral membrane protein sed5.
    
 0.729
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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