STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_2894Uncharacterized protein. (1299 aa)    
Predicted Functional Partners:
B9Z65_8400
Midasin.
   
 0.885
B9Z65_6875
Uncharacterized protein.
    
 
 0.599
B9Z65_6928
Nudix hydrolase domain-containing protein.
    
 
 0.550
B9Z65_8453
Uncharacterized protein.
  
 
  0.505
B9Z65_2568
Uncharacterized protein.
  
 
  0.500
B9Z65_40
BZIP domain-containing protein.
  
 
  0.497
B9Z65_8688
Uncharacterized protein.
  
 
   0.466
B9Z65_3598
Uncharacterized protein.
  
 
  0.464
B9Z65_8488
RNA polymerase I-specific transcription initiation factor rrn11.
  
 
  0.452
B9Z65_1961
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 
 0.451
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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