STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_7844F-box domain-containing protein. (453 aa)    
Predicted Functional Partners:
B9Z65_5876
LisH domain-containing protein.
   
 0.925
B9Z65_7894
Transcription initiation factor TFIID subunit 5.
   
 0.879
B9Z65_5043
SAGA-associated factor 73.
    
 0.863
B9Z65_5441
TFIID_20kDa domain-containing protein.
    
 0.863
B9Z65_3199
Uncharacterized protein.
    
 0.862
B9Z65_3675
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.857
B9Z65_1626
Uncharacterized protein.
    
 0.847
B9Z65_1827
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.847
B9Z65_6380
SAGA complex subunit spt3.
    
 0.845
B9Z65_924
SGF29 C-terminal domain-containing protein.
    
 0.840
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.